Sadakata et al.(1) reported that a CADPS2 isoform lacking exon 3 is aberrantly spliced in the peripheral blood of autistic patients. However, we found this splice isoform in the blood of normal subjects at a similar frequency to that of individuals with autism spectrum disorder (ASD)(95% CI of the difference,–0.06 to 0.1). Moreover, this splice variant exists as a minor isoform in cerebellar RNA of both normal individuals and individuals with ASD. Thus, exon 3 skipping likely represents a minor isoform rather than aberrant splicing and is probably not an underlying mechanism of autism. Defects of CADPS2 function might contribute to autism susceptibility, but likely not through aberrant splicing. Sadakata et al.(1) reported that 4 of 16 patients with autism expressed an exon 3–skipped variant of CADPS2 mRNA in the blood, while the CADPS2 mRNA of all 24 normal subjects included exon 3. They thus concluded that CADPS2 is aberrantly spliced in autism, and they performed further experiments showing that the subcellular localization of exogenously expressed exon 3–skipped CADPS2 is disturbed in primary cultured neocortical and cerebellar neurons.

We aimed to replicate the CADPS2 findings in an independent set of peripheral blood samples from 41 children with ASD and 39 control children, following the Sadakata et al. protocols (Figure 1A). Furthermore, we performed sequencing (Figure 1B) and nested priming (Figure 1C) to validate the presence or absence of exon 3. Our results showed that, of 39 control samples, 1 was apparently homozygous for the exon 3–skipped allele in peripheral blood, 5 were heterozygous, and 33 were wild type. Of the 41 ASD samples, 5 were heterozygous for the exon 3–skipped isoform, while the rest were wild type.